NEW YORK--A judge on Friday confirmed a liquidation plan for MF Global Holdings Ltd. (MFGLQ), both a milestone and a beginning to an end of one of the more notable brokerage collapses in history.

Judge Martin Glenn of U.S. Bankruptcy Court in Manhattan approved the proposal, presented by a group of hedge funds that hold about $1 billion in unsecured MF Global bonds.

"It's been a long road to get to this point," Judge Glenn said.

The decision came a day after Louis J. Freeh, the trustee overseeing the bankruptcy of MF Global, issued a scathing report about former Chief Executive Jon S. Corzine, blaming the former New Jersey governor and Goldman Sachs Group Inc. (GS) chairman for the company's epic collapse.

Mr. Freeh himself spoke in court Friday, citing "really an extraordinary amount of good and positive work" by the parties involved.

"We've taken it to a very good point and successful point in 17 months of work," Mr. Freeh said.

In confirming the plan, Judge Glenn overruled an objection by longtime MF Global adversary Sapere Wealth Management, which argued how its $70 million in remaining claims were being treated. During the hearing, MF Global worked out a language change with a lawyer for U.S. Attorney Preet Bharara, who had thought the plan unfairly shielded certain third parties from prosecution. The changes will allow the U.S. more flexibility if it wants to sue third parties related to MF Global later in the case.

Another objection, from bankruptcy monitor Tracy Hope Davis of the U.S. Trustee's Office, took issue with fee reimbursements to Silver Point Capital LP and the other hedge funds that presented the liquidation proposal. But Judge Glenn said he wouldn't decide that matter on Friday.

"I've got to be the one to make this determination, not somebody else," Judge Glenn said to a lawyer for the hedge funds, which proposed the fees. He did say "a very strong case has been made" that the creditors deserve the fees.

The liquidation plan filed by the hedge funds calls for holders of about $1 billion in MF Global's unsecured bonds to recover between 12 cents and 42 cents on the dollar for their claims under the plan, with those holding claims on a $1.2 billion revolving loan getting more, between 27 cents and 80 cents on the dollar.

While it is the group of hedge funds that filed the proposal, the MF Global holding company's bankruptcy is being administered by former Federal Bureau of Investigation Director Mr. Freeh. MF Global's broker-dealer business isn't technically in bankruptcy, but rather is being overseen by James W. Giddens, who is winding down the business under the Securities Investor Protection Act, which governs the liquidation of failed brokerages.

Late last year, Mr. Freeh, Mr. Giddens and a third official liquidating MF Global's U.K. arm struck a wide-ranging deal designed to get customers their money back more quickly and settle disputes among themselves. That set in motion a chain of events that led to the filing of a payback plan by the creditors.

Individual customers of MF Global's broker-dealer have received most of their money back through a series of bulk transfers initiated by Mr. Giddens and approved by the court.

MF Global, led by Mr. Corzine, collapsed in October 2011 when customers panicked over the New York firm's large bets on European debt. The firm's collapse into bankruptcy initially exposed a $1.6 billion shortfall in U.S. customer accounts, although Mr. Freeh in court Friday reiterated that he believes all that money is expected to be restored.

(Dow Jones Daily Bankruptcy Review covers news about distressed companies and those under bankruptcy protection. Go to http://dbr.dowjones.com)

Write to Joseph Checkler at joseph.checkler@dowjones.com. Follow him on Twitter at @JoeCheckler

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