WASHINGTON-- Comcast Corp.'s soon-to-be abandoned plan to acquire Time Warner Cable Inc. ran up against the challenge of overcoming scrutiny by two federal agencies, including a Justice Department antitrust review that was more skeptical than some expected.

Both the department and the Federal Communications Commission conducted exhaustive reviews of the $45.2 billion deal, with Justice raising competition concerns and the FCC considering whether the tie-up was in the public interest.

FCC staff put up stiff resistance to the deal, a factor that played a key role in its demise.

"When you've got a deal that faces multiple regulators like this, in a regime where enforcement has been a priority, the regulators have more tools at their disposal," said antitrust lawyer Amanda Wait of Hunton & Williams LLP.

The withering of the transaction is the latest example of a large, ambitious telecommunications merger to falter under scrutiny by the Obama administration, which has promised to evaluate deals vigorously for possible consumer harm.

The challenge of prevailing on two regulatory fronts proved too much for Comcast, just as it did for AT&T Inc. in 2011 when it dropped its planned acquisition of rival T-Mobile USA. There, the Justice Department sued to block the deal and the FCC prepared to initiate separate proceedings before an administrative law judge.

In most industries, merging parties don't run the gantlet at two separate agencies. The FCC process is a particular challenge if the commission decides to send a merger for an administrative hearing, a move that can effectively kill a deal. FCC staffers favored such an approach for the Comcast deal, The Wall Street Journal reported on Wednesday.

"The FCC can just put the companies in the dock and they can't do anything about it," said Washington lawyer Michael Keeley of Axinn, Veltrop & Harkrider LLP. He also said the Comcast episode demonstrated how negative public opinion about a merger can matter during reviews.

When the deal was announced, some observers had questioned whether the Justice Department would be able to make much of an antitrust case against it, given that the two companies didn't compete head-to-head in the same geographic markets. But the department focused on concerns the deal could cause competitive harm by giving the merged firm too much power over broadband, TV channel owners and the future development of the online video marketplace.

Gene Kimmelman, a former top Justice antitrust official in the current administration, said the government's approach to the Comcast-Time Warner Cable deal "sets a new high bar for antitrust enforcement and regulatory oversight" and would open the door for content providers and technology companies to provide new broadband video offerings.

Mr. Kimmelman, now president of the public interest group Public Knowledge, which opposed the deal, said the department evaluated the deal with a forward looking approach that took into account future dynamics of the marketplace. He said antitrust officials were intimately familiar with Comcast and its place in the market because the Time Warner Cable deal marked the third time in recent years that Comcast had sought Justice approval for a transaction.

Media companies lobbied aggressively to kill it, including Discovery Communications Inc. Other programmers including Time Warner Inc., Walt Disney Co. and 21st Century Fox Inc., which until 2013 was part of the same company as Wall Street Journal owner News Corp, privately raised concerns about the deal to regulators.

Write to Brent Kendall at brent.kendall@wsj.com

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