European researchers said Friday that an experimental Ebola vaccine tested in Guinea "might be effective" in protecting people from the deadly virus, but behind the scenes, questions have been raised over the way the study was conducted.

The vaccine, from Merck & Co. and NewLink Genetics Corp. and dubbed VSV-ZEBOV, is one of a handful of vaccines and drugs that were rushed into bigger studies after a massive Ebola outbreak hit West Africa last year. About 27,780 people have been infected and about 11,290 have died, according to the World Health Organization (http://apps.who.int/ebola/ebola-situation-reports).

In the Guinea trial, 4,123 people were assigned to immediate vaccination, and 3,528 were assigned to delayed vaccination.

The results, published in The Lancet, suggest the vaccine may be highly effective, with no patients getting sick who immediately got the vaccine; by contrast, 16 people got sick in the control group of people who were vaccinated 21 days after exposure.

People familiar with the issue said the U.S. Food and Drug Administration has prepared a critical commentary about the study, but that The Lancet, the British journal that is making the study public online Friday, declined to publish the commentary simultaneously.

Also, U.S. officials said that the researchers changed the protocol during the trial—generally a troublesome step—by deciding to measure cases only after a 10-day cutoff. The European researchers weren't immediately available to comment.

Mark Feinberg, chief public health and scientific officer for Merck said, that "the hope was a vaccine might be developed in sufficient time to have an impact to help control and maybe help eliminate this Ebola outbreak if it were to persist." He added, "The study did provide strong evidence supporting vaccine efficacy. Whether this evidence by itself will be seen by all stakeholders as definitive will be an important discussion.

Write to Thomas M. Burton at tom.burton@wsj.com and Peter Loftus at peter.loftus@wsj.com

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